JHU / NCDC Sequencing Workshop

In this workshop you will find a list of training videos on sequencing.

1. Introduction to Pathogen Sequencing

2. Introduction to Genomic Epidemiology

3-1. Laboratory Methods for Pathogen Sequencing

3-2. Fluorometric DNA Quantitation

4-1. Setting Up a MinION Sequencing Run

4-2. Loading the MinION Sequencer

5. Introduction to Sequencing Bioinformatics

6-1. Introduction to the Command Line

6-2. Running the SARS-CoV-2 Assembly Pipeline

7. Manipulating Sequence Data

8. Multiple Sequence Alignments

9. Phylogenetic Trees